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Cluster: AG066_64_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_103163 k141_103163_1 52 1473 - GH1
TC k141_103163 k141_103163_2 1549 3306 - 4.A.3.1.1
TF k141_103163 k141_103163_3 3582 4592 + LacI
TC k141_103163 k141_103163_4 4927 6687 - 4.A.3.1.1
CAZyme k141_103163 k141_103163_5 6864 8306 - GH1
TF k141_103163 k141_103163_6 8648 9685 + LacI
CAZyme k141_103163 k141_103163_7 9947 11386 - GH1
TC k141_103163 k141_103163_8 11453 13228 - 4.A.3.1.1
TF k141_103163 k141_103163_9 13584 14588 + LacI
TC k141_103163 k141_103163_10 14803 15141 + 4.A.3.1.2
Gene ID: k141_103163_1
Type: CAZyme
Location: 52 - 1473 (-)
Gene ID: k141_103163_2
Type: TC
Location: 1549 - 3306 (-)
Gene ID: k141_103163_3
Type: TF
Location: 3582 - 4592 (+)
Gene ID: k141_103163_4
Type: TC
Location: 4927 - 6687 (-)
Gene ID: k141_103163_5
Type: CAZyme
Location: 6864 - 8306 (-)
Gene ID: k141_103163_6
Type: TF
Location: 8648 - 9685 (+)
Gene ID: k141_103163_7
Type: CAZyme
Location: 9947 - 11386 (-)
Gene ID: k141_103163_8
Type: TC
Location: 11453 - 13228 (-)
Gene ID: k141_103163_9
Type: TF
Location: 13584 - 14588 (+)
Gene ID: k141_103163_10
Type: TC
Location: 14803 - 15141 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_103163_6 vegetarian > omnivore 1.08773 0.01560

🧭 Explore Read Mapping of CGC

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