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Cluster: AG065_bin.4_sub_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_13810 k141_13810_4 1571 2494 - GT2
pfam k141_13810 k141_13810_5 2613 3626 + Asparaginase | Asparaginase_C
pfam k141_13810 k141_13810_6 3623 4156 + DUF2284
TC k141_13810 k141_13810_7 4351 5712 + 2.A.3.8.12
pfam k141_13810 k141_13810_8 5877 7277 + SLH
TF k141_13810 k141_13810_9 7435 7800 + GntR
TC k141_13810 k141_13810_10 7793 8518 + 3.A.1.132.6
Gene ID: k141_13810_4
Type: CAZyme
Location: 1571 - 2494 (-)
Gene ID: k141_13810_5
Type: pfam
Location: 2613 - 3626 (+)
Gene ID: k141_13810_6
Type: pfam
Location: 3623 - 4156 (+)
Gene ID: k141_13810_7
Type: TC
Location: 4351 - 5712 (+)
Gene ID: k141_13810_8
Type: pfam
Location: 5877 - 7277 (+)
Gene ID: k141_13810_9
Type: TF
Location: 7435 - 7800 (+)
Gene ID: k141_13810_10
Type: TC
Location: 7793 - 8518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_13810_10 vegan > omnivore 1.31046 0.01560

🧭 Explore Read Mapping of CGC

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