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Cluster: AG065_bin.4_sub_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40205 k141_40205_3 1433 2167 - 3.A.1.3.20
TC k141_40205 k141_40205_4 2160 2936 - 3.A.1.3.20
TC k141_40205 k141_40205_5 2949 3827 - 3.A.1.3.20
pfam k141_40205 k141_40205_6 4268 5083 - SpoU_methylase
TC k141_40205 k141_40205_7 5241 6113 + 2.A.115.1.2
TC k141_40205 k141_40205_8 6415 7797 - 1.A.26.1.2
pfam k141_40205 k141_40205_9 8120 9277 + tRNA-synt_2c | DHHA1 | tRNA_SAD
CAZyme k141_40205 k141_40205_10 9256 9948 - CE4
Gene ID: k141_40205_3
Type: TC
Location: 1433 - 2167 (-)
Gene ID: k141_40205_4
Type: TC
Location: 2160 - 2936 (-)
Gene ID: k141_40205_5
Type: TC
Location: 2949 - 3827 (-)
Gene ID: k141_40205_6
Type: pfam
Location: 4268 - 5083 (-)
Gene ID: k141_40205_7
Type: TC
Location: 5241 - 6113 (+)
Gene ID: k141_40205_8
Type: TC
Location: 6415 - 7797 (-)
Gene ID: k141_40205_9
Type: pfam
Location: 8120 - 9277 (+)
Gene ID: k141_40205_10
Type: CAZyme
Location: 9256 - 9948 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40205_4 vegetarian > vegan 1.30942 0.00181
k141_40205_6 vegetarian > vegan 1.02557 0.00181

🧭 Explore Read Mapping of CGC

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