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Cluster: AG058_maxbin.005_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_136414 k141_136414_28 31408 32487 + 8.A.21.2.4
NULL(UNKNOWN) k141_136414 k141_136414_29 32717 33427 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_136414 k141_136414_30 33442 34329 - HTH_AraC | HTH_AraC
CAZyme k141_136414 k141_136414_31 34393 36216 + GH20
TF k141_136414 k141_136414_32 36259 37263 - LacI
CAZyme k141_136414 k141_136414_33 37438 38715 + GH1
TF k141_136414 k141_136414_34 38716 39723 - GntR
pfam k141_136414 k141_136414_35 40168 40458 - RelB
CAZyme k141_136414 k141_136414_36 40604 42202 - GH63
TF k141_136414 k141_136414_37 42327 43229 + HTH_AraC
TC k141_136414 k141_136414_38 43234 46209 - 1.I.1.1.3
STP k141_136414 k141_136414_39 46264 47502 - Aminotran_1_2
CAZyme k141_136414 k141_136414_40 47610 48929 - GH13
Gene ID: k141_136414_28
Type: TC
Location: 31408 - 32487 (+)
Gene ID: k141_136414_29
Type:
Location: 32717 - 33427 (+)
Gene ID: k141_136414_30
Type: TF
Location: 33442 - 34329 (-)
Gene ID: k141_136414_31
Type: CAZyme
Location: 34393 - 36216 (+)
Gene ID: k141_136414_32
Type: TF
Location: 36259 - 37263 (-)
Gene ID: k141_136414_33
Type: CAZyme
Location: 37438 - 38715 (+)
Gene ID: k141_136414_34
Type: TF
Location: 38716 - 39723 (-)
Gene ID: k141_136414_35
Type: pfam
Location: 40168 - 40458 (-)
Gene ID: k141_136414_36
Type: CAZyme
Location: 40604 - 42202 (-)
Gene ID: k141_136414_37
Type: TF
Location: 42327 - 43229 (+)
Gene ID: k141_136414_38
Type: TC
Location: 43234 - 46209 (-)
Gene ID: k141_136414_39
Type: STP
Location: 46264 - 47502 (-)
Gene ID: k141_136414_40
Type: CAZyme
Location: 47610 - 48929 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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