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Cluster: AG058_maxbin.005_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_365633 k141_365633_26 35900 38971 + GH38
TF k141_365633 k141_365633_27 38975 39868 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_365633 k141_365633_28 40009 40740 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_365633 k141_365633_29 40750 43959 + GH148 | GH148
TC k141_365633 k141_365633_30 44048 45100 - 9.B.157.1.1
pfam k141_365633 k141_365633_31 45122 46390 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
CAZyme k141_365633 k141_365633_32 46551 48266 - GH127
pfam k141_365633 k141_365633_33 48678 49934 + SLFN_AlbA_2
pfam k141_365633 k141_365633_34 49956 50957 - NAD_Gly3P_dh_N | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact
TC k141_365633 k141_365633_35 50954 51604 - 9.B.31.1.1
Gene ID: k141_365633_26
Type: CAZyme
Location: 35900 - 38971 (+)
Gene ID: k141_365633_27
Type: TF
Location: 38975 - 39868 (-)
Gene ID: k141_365633_28
Type:
Location: 40009 - 40740 (+)
Gene ID: k141_365633_29
Type: CAZyme
Location: 40750 - 43959 (+)
Gene ID: k141_365633_30
Type: TC
Location: 44048 - 45100 (-)
Gene ID: k141_365633_31
Type: pfam
Location: 45122 - 46390 (-)
Gene ID: k141_365633_32
Type: CAZyme
Location: 46551 - 48266 (-)
Gene ID: k141_365633_33
Type: pfam
Location: 48678 - 49934 (+)
Gene ID: k141_365633_34
Type: pfam
Location: 49956 - 50957 (-)
Gene ID: k141_365633_35
Type: TC
Location: 50954 - 51604 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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