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Cluster: AG058_maxbin.005_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_184327 k141_184327_1 2 2914 + GH148
pfam k141_184327 k141_184327_2 2978 3664 - PhoU | PhoU
TC k141_184327 k141_184327_3 3692 4477 - 3.A.1.7.1
TC k141_184327 k141_184327_4 4474 5343 - 3.A.1.7.1
TC k141_184327 k141_184327_5 5340 6317 - 3.A.1.7.1
TC k141_184327 k141_184327_6 6325 7341 - 3.A.1.7.1
pfam k141_184327 k141_184327_7 7484 8026 - CBM_4_9
CAZyme k141_184327 k141_184327_8 8038 10968 - GH39
Gene ID: k141_184327_1
Type: CAZyme
Location: 2 - 2914 (+)
Gene ID: k141_184327_2
Type: pfam
Location: 2978 - 3664 (-)
Gene ID: k141_184327_3
Type: TC
Location: 3692 - 4477 (-)
Gene ID: k141_184327_4
Type: TC
Location: 4474 - 5343 (-)
Gene ID: k141_184327_5
Type: TC
Location: 5340 - 6317 (-)
Gene ID: k141_184327_6
Type: TC
Location: 6325 - 7341 (-)
Gene ID: k141_184327_7
Type: pfam
Location: 7484 - 8026 (-)
Gene ID: k141_184327_8
Type: CAZyme
Location: 8038 - 10968 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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