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Cluster: AG056_56_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_166495 k141_166495_8 6621 9050 + 8.A.3.3.2
pfam k141_166495 k141_166495_9 9056 10093 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
pfam k141_166495 k141_166495_10 10137 11393 + Wzy_C
CAZyme k141_166495 k141_166495_11 11369 12574 + GT4
pfam k141_166495 k141_166495_12 12571 13839 + Wzy_C
CAZyme k141_166495 k141_166495_13 13836 14912 + GT4
CAZyme k141_166495 k141_166495_14 14909 16060 + GT4
pfam k141_166495 k141_166495_15 16089 16640 - Hexapep | Hexapep_2
CAZyme k141_166495 k141_166495_16 16598 17749 - GT4
CAZyme k141_166495 k141_166495_17 17755 18711 - GT2
CAZyme k141_166495 k141_166495_18 18778 19761 - GT2
Gene ID: k141_166495_8
Type: TC
Location: 6621 - 9050 (+)
Gene ID: k141_166495_9
Type: pfam
Location: 9056 - 10093 (+)
Gene ID: k141_166495_10
Type: pfam
Location: 10137 - 11393 (+)
Gene ID: k141_166495_11
Type: CAZyme
Location: 11369 - 12574 (+)
Gene ID: k141_166495_12
Type: pfam
Location: 12571 - 13839 (+)
Gene ID: k141_166495_13
Type: CAZyme
Location: 13836 - 14912 (+)
Gene ID: k141_166495_14
Type: CAZyme
Location: 14909 - 16060 (+)
Gene ID: k141_166495_15
Type: pfam
Location: 16089 - 16640 (-)
Gene ID: k141_166495_16
Type: CAZyme
Location: 16598 - 17749 (-)
Gene ID: k141_166495_17
Type: CAZyme
Location: 17755 - 18711 (-)
Gene ID: k141_166495_18
Type: CAZyme
Location: 18778 - 19761 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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