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Cluster: AG040_bin.5_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15942 k141_15942_14 14574 15872 - 4.A.3.2.6
TC k141_15942 k141_15942_15 15897 16193 - 4.A.3.2.2
CAZyme k141_15942 k141_15942_16 16205 17599 - GH1
TF k141_15942 k141_15942_17 17979 19892 - Mga
TC k141_15942 k141_15942_18 20203 21549 - 2.A.1.84.2
CAZyme k141_15942 k141_15942_19 21607 23475 - GH2
pfam k141_15942 k141_15942_20 23735 26278 - UvrA_DNA-bind
NULL(UNKNOWN) k141_15942 k141_15942_21 26596 27483 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_15942 k141_15942_22 27883 28794 + 4.A.1.2.3
Gene ID: k141_15942_14
Type: TC
Location: 14574 - 15872 (-)
Gene ID: k141_15942_15
Type: TC
Location: 15897 - 16193 (-)
Gene ID: k141_15942_16
Type: CAZyme
Location: 16205 - 17599 (-)
Gene ID: k141_15942_17
Type: TF
Location: 17979 - 19892 (-)
Gene ID: k141_15942_18
Type: TC
Location: 20203 - 21549 (-)
Gene ID: k141_15942_19
Type: CAZyme
Location: 21607 - 23475 (-)
Gene ID: k141_15942_20
Type: pfam
Location: 23735 - 26278 (-)
Gene ID: k141_15942_21
Type:
Location: 26596 - 27483 (+)
Gene ID: k141_15942_22
Type: TC
Location: 27883 - 28794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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