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Cluster: AG040_bin.5_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_109046 k141_109046_22 24903 26309 + GH1
TC k141_109046 k141_109046_23 26347 27810 + 4.A.3.2.8
TC k141_109046 k141_109046_24 27880 28182 + 4.A.3.2.8
TC k141_109046 k141_109046_25 28259 28600 + 4.A.3.2.2
TC k141_109046 k141_109046_26 29007 29666 + 9.B.27.2.3
CAZyme k141_109046 k141_109046_27 30602 33568 + GH3
TC k141_109046 k141_109046_28 33703 34554 - 3.A.1.24.5
TC k141_109046 k141_109046_29 34629 35300 - 3.A.1.24.5
TC k141_109046 k141_109046_30 35293 36039 - 3.A.1.24.1
STP k141_109046 k141_109046_31 36329 37738 - HATPase_c
TF k141_109046 k141_109046_32 37735 38451 - LytTR
CAZyme k141_109046 k141_109046_33 38606 41737 + GH3
CAZyme k141_109046 k141_109046_34 42337 44814 + GH3
CAZyme k141_109046 k141_109046_35 45068 47566 + GH3
Gene ID: k141_109046_22
Type: CAZyme
Location: 24903 - 26309 (+)
Gene ID: k141_109046_23
Type: TC
Location: 26347 - 27810 (+)
Gene ID: k141_109046_24
Type: TC
Location: 27880 - 28182 (+)
Gene ID: k141_109046_25
Type: TC
Location: 28259 - 28600 (+)
Gene ID: k141_109046_26
Type: TC
Location: 29007 - 29666 (+)
Gene ID: k141_109046_27
Type: CAZyme
Location: 30602 - 33568 (+)
Gene ID: k141_109046_28
Type: TC
Location: 33703 - 34554 (-)
Gene ID: k141_109046_29
Type: TC
Location: 34629 - 35300 (-)
Gene ID: k141_109046_30
Type: TC
Location: 35293 - 36039 (-)
Gene ID: k141_109046_31
Type: STP
Location: 36329 - 37738 (-)
Gene ID: k141_109046_32
Type: TF
Location: 37735 - 38451 (-)
Gene ID: k141_109046_33
Type: CAZyme
Location: 38606 - 41737 (+)
Gene ID: k141_109046_34
Type: CAZyme
Location: 42337 - 44814 (+)
Gene ID: k141_109046_35
Type: CAZyme
Location: 45068 - 47566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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