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Cluster: AG032_bin.84_sub_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_285309 k141_285309_18 17486 19222 + GH129
STP k141_285309 k141_285309_19 19340 20566 + SBP_bac_1
TC k141_285309 k141_285309_20 20678 21622 + 3.A.1.1.20
TC k141_285309 k141_285309_21 21640 22470 + 3.A.1.1.18
TF k141_285309 k141_285309_22 22615 23457 - HTH_AraC | HTH_AraC
CAZyme k141_285309 k141_285309_23 23558 24763 + GH109
pfam k141_285309 k141_285309_24 25096 25407 + SH3_3
CAZyme k141_285309 k141_285309_25 25496 26104 - GH31_19
Gene ID: k141_285309_18
Type: CAZyme
Location: 17486 - 19222 (+)
Gene ID: k141_285309_19
Type: STP
Location: 19340 - 20566 (+)
Gene ID: k141_285309_20
Type: TC
Location: 20678 - 21622 (+)
Gene ID: k141_285309_21
Type: TC
Location: 21640 - 22470 (+)
Gene ID: k141_285309_22
Type: TF
Location: 22615 - 23457 (-)
Gene ID: k141_285309_23
Type: CAZyme
Location: 23558 - 24763 (+)
Gene ID: k141_285309_24
Type: pfam
Location: 25096 - 25407 (+)
Gene ID: k141_285309_25
Type: CAZyme
Location: 25496 - 26104 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_285309_24 vegetarian > omnivore 2.15222 0.01540

🧭 Explore Read Mapping of CGC

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