Cluster: AG032_bin.84_sub_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: AG032_bin.84_sub
- CGC Family ID: CGCFAM_03175
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_121657 | k141_121657_5 | 3728 | 4222 | - | 1.E.19.1.7 |
| CAZyme | k141_121657 | k141_121657_6 | 4286 | 5266 | - | GT2 |
| pfam | k141_121657 | k141_121657_7 | 5308 | 6828 | - | Peptidase_C14 | CHAT |
| pfam | k141_121657 | k141_121657_8 | 6923 | 7834 | - | PG_binding_1 | CHAP |
| TC | k141_121657 | k141_121657_9 | 7859 | 9415 | - | 3.A.1.5.3 |
| CAZyme | k141_121657 | k141_121657_10 | 9412 | 11085 | - | GH23 |
Gene ID: k141_121657_5
Type: TC
Location: 3728 - 4222 (-)
Type: TC
Location: 3728 - 4222 (-)
Gene ID: k141_121657_6
Type: CAZyme
Location: 4286 - 5266 (-)
Type: CAZyme
Location: 4286 - 5266 (-)
Gene ID: k141_121657_7
Type: pfam
Location: 5308 - 6828 (-)
Type: pfam
Location: 5308 - 6828 (-)
Gene ID: k141_121657_8
Type: pfam
Location: 6923 - 7834 (-)
Type: pfam
Location: 6923 - 7834 (-)
Gene ID: k141_121657_9
Type: TC
Location: 7859 - 9415 (-)
Type: TC
Location: 7859 - 9415 (-)
Gene ID: k141_121657_10
Type: CAZyme
Location: 9412 - 11085 (-)
Type: CAZyme
Location: 9412 - 11085 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp004556545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_121657_7 | vegetarian > omnivore | 1.99846 | 0.01540 |
| k141_121657_7 | vegetarian > vegan | 1.08800 | 0.01135 |
| k141_121657_8 | vegetarian > omnivore | 1.40279 | 0.01540 |
| k141_121657_8 | vegetarian > vegan | 1.10496 | 0.01135 |
| k141_121657_9 | vegetarian > omnivore | 1.54591 | 0.01540 |
| k141_121657_10 | vegetarian > omnivore | 2.41794 | 0.01540 |