Cluster: AG032_bin.84_sub_CGC47
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: AG032_bin.84_sub
- CGC Family ID: CGCFAM_04233
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_173747 | k141_173747_2 | 1225 | 2028 | + | 2.A.79.1.5 |
| pfam | k141_173747 | k141_173747_3 | 2025 | 2462 | + | ThrE | ThrE_2 |
| CAZyme | k141_173747 | k141_173747_4 | 2592 | 4922 | + | GH2 |
| TC | k141_173747 | k141_173747_5 | 5216 | 6172 | + | 3.A.1.1.10 |
| TC | k141_173747 | k141_173747_6 | 6191 | 7114 | + | 3.A.1.1.10 |
| STP | k141_173747 | k141_173747_7 | 7176 | 8732 | + | SBP_bac_1 |
| TF | k141_173747 | k141_173747_8 | 8882 | 11092 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_173747 | k141_173747_9 | 11150 | 13150 | - | GH42 |
Gene ID: k141_173747_2
Type: TC
Location: 1225 - 2028 (+)
Type: TC
Location: 1225 - 2028 (+)
Gene ID: k141_173747_3
Type: pfam
Location: 2025 - 2462 (+)
Type: pfam
Location: 2025 - 2462 (+)
Gene ID: k141_173747_4
Type: CAZyme
Location: 2592 - 4922 (+)
Type: CAZyme
Location: 2592 - 4922 (+)
Gene ID: k141_173747_5
Type: TC
Location: 5216 - 6172 (+)
Type: TC
Location: 5216 - 6172 (+)
Gene ID: k141_173747_6
Type: TC
Location: 6191 - 7114 (+)
Type: TC
Location: 6191 - 7114 (+)
Gene ID: k141_173747_7
Type: STP
Location: 7176 - 8732 (+)
Type: STP
Location: 7176 - 8732 (+)
Gene ID: k141_173747_8
Type: TF
Location: 8882 - 11092 (+)
Type: TF
Location: 8882 - 11092 (+)
Gene ID: k141_173747_9
Type: CAZyme
Location: 11150 - 13150 (-)
Type: CAZyme
Location: 11150 - 13150 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp004556545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_173747_2 | vegetarian > omnivore | 1.10145 | 0.01540 |
| k141_173747_3 | vegetarian > omnivore | 1.97117 | 0.01540 |
| k141_173747_4 | vegetarian > omnivore | 2.13261 | 0.01540 |
| k141_173747_5 | vegetarian > omnivore | 2.14191 | 0.01540 |
| k141_173747_6 | vegetarian > omnivore | 1.91334 | 0.01540 |
| k141_173747_7 | vegetarian > omnivore | 1.10759 | 0.01540 |
| k141_173747_9 | vegetarian > omnivore | 1.30985 | 0.01540 |