Cluster: AG032_bin.84_sub_CGC36
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: AG032_bin.84_sub
- CGC Family ID: CGCFAM_04509
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_116279 | k141_116279_4 | 3345 | 4787 | - | GH32 |
| CAZyme | k141_116279 | k141_116279_5 | 4784 | 6481 | - | GH13_31 |
| pfam | k141_116279 | k141_116279_6 | 6579 | 7421 | - | Exo_endo_phos |
| TC | k141_116279 | k141_116279_7 | 7402 | 8235 | - | 3.A.1.1.28 |
| TC | k141_116279 | k141_116279_8 | 8236 | 9141 | - | 3.A.1.1.28 |
| TC | k141_116279 | k141_116279_9 | 9233 | 10447 | - | 3.A.1.1.44 |
| TC | k141_116279 | k141_116279_10 | 10711 | 12486 | + | 9.B.33.1.1 |
Gene ID: k141_116279_4
Type: CAZyme
Location: 3345 - 4787 (-)
Type: CAZyme
Location: 3345 - 4787 (-)
Gene ID: k141_116279_5
Type: CAZyme
Location: 4784 - 6481 (-)
Type: CAZyme
Location: 4784 - 6481 (-)
Gene ID: k141_116279_6
Type: pfam
Location: 6579 - 7421 (-)
Type: pfam
Location: 6579 - 7421 (-)
Gene ID: k141_116279_7
Type: TC
Location: 7402 - 8235 (-)
Type: TC
Location: 7402 - 8235 (-)
Gene ID: k141_116279_8
Type: TC
Location: 8236 - 9141 (-)
Type: TC
Location: 8236 - 9141 (-)
Gene ID: k141_116279_9
Type: TC
Location: 9233 - 10447 (-)
Type: TC
Location: 9233 - 10447 (-)
Gene ID: k141_116279_10
Type: TC
Location: 10711 - 12486 (+)
Type: TC
Location: 10711 - 12486 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp004556545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_116279_4 | vegetarian > omnivore | 1.12168 | 0.01540 |
| k141_116279_7 | vegetarian > omnivore | 2.69985 | 0.01540 |
| k141_116279_7 | vegetarian > vegan | 1.10774 | 0.01135 |
| k141_116279_8 | vegetarian > omnivore | 1.73837 | 0.01540 |
| k141_116279_9 | vegetarian > omnivore | 1.61110 | 0.01540 |