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Cluster: AG032_bin.84_sub_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_170597 k141_170597_1 325 2169 - GH20
CAZyme k141_170597 k141_170597_2 2172 5273 - GH38
CAZyme k141_170597 k141_170597_3 5325 6311 - GH130_2
STP k141_170597 k141_170597_4 6675 8090 - SBP_bac_1
TC k141_170597 k141_170597_5 8117 9040 - 3.A.1.1.29
TC k141_170597 k141_170597_6 9056 10036 - 3.A.1.1.29
TF k141_170597 k141_170597_7 10331 11377 + LacI
CAZyme k141_170597 k141_170597_8 11389 13635 + GH3
Gene ID: k141_170597_1
Type: CAZyme
Location: 325 - 2169 (-)
Gene ID: k141_170597_2
Type: CAZyme
Location: 2172 - 5273 (-)
Gene ID: k141_170597_3
Type: CAZyme
Location: 5325 - 6311 (-)
Gene ID: k141_170597_4
Type: STP
Location: 6675 - 8090 (-)
Gene ID: k141_170597_5
Type: TC
Location: 8117 - 9040 (-)
Gene ID: k141_170597_6
Type: TC
Location: 9056 - 10036 (-)
Gene ID: k141_170597_7
Type: TF
Location: 10331 - 11377 (+)
Gene ID: k141_170597_8
Type: CAZyme
Location: 11389 - 13635 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_170597_4 vegetarian > vegan 1.78307 0.01135
k141_170597_6 vegetarian > vegan 1.50242 0.01135
k141_170597_8 vegetarian > omnivore 2.06530 0.01540

🧭 Explore Read Mapping of CGC

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