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Cluster: AG032_bin.84_sub_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_114542 k141_114542_4 2105 3826 - CBM34 | GH13_20
TC k141_114542 k141_114542_5 3834 4733 - 3.A.1.1.27
TC k141_114542 k141_114542_6 4730 6085 - 3.A.1.1.27
STP k141_114542 k141_114542_7 6228 7406 - SBP_bac_1
TC k141_114542 k141_114542_8 7653 8426 - 3.A.1.34.1
TC k141_114542 k141_114542_9 8419 9297 - 3.A.1.34.1
pfam k141_114542 k141_114542_10 9411 10391 - ABC_sub_bind
CAZyme k141_114542 k141_114542_11 10916 11695 + CE1
TC k141_114542 k141_114542_12 11702 12523 + 1.C.109.1.5
Gene ID: k141_114542_4
Type: CAZyme
Location: 2105 - 3826 (-)
Gene ID: k141_114542_5
Type: TC
Location: 3834 - 4733 (-)
Gene ID: k141_114542_6
Type: TC
Location: 4730 - 6085 (-)
Gene ID: k141_114542_7
Type: STP
Location: 6228 - 7406 (-)
Gene ID: k141_114542_8
Type: TC
Location: 7653 - 8426 (-)
Gene ID: k141_114542_9
Type: TC
Location: 8419 - 9297 (-)
Gene ID: k141_114542_10
Type: pfam
Location: 9411 - 10391 (-)
Gene ID: k141_114542_11
Type: CAZyme
Location: 10916 - 11695 (+)
Gene ID: k141_114542_12
Type: TC
Location: 11702 - 12523 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_114542_4 vegetarian > vegan 1.04573 0.01135
k141_114542_9 vegetarian > omnivore 1.04167 0.01540

🧭 Explore Read Mapping of CGC

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