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Cluster: AG032_bin.84_sub_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_123813 k141_123813_2 1420 2289 + 2.A.115.1.5
pfam k141_123813 k141_123813_3 2656 3387 - DDE_Tnp_1 | DUF772 | DDE_Tnp_1_3
pfam k141_123813 k141_123813_4 3541 4290 - SH3_3
TC k141_123813 k141_123813_5 5444 7255 - 9.B.33.1.1
STP k141_123813 k141_123813_6 7442 8665 + SBP_bac_1
TC k141_123813 k141_123813_7 8749 9660 + 3.A.1.1.25
TC k141_123813 k141_123813_8 9673 10506 + 3.A.1.1.41
TF k141_123813 k141_123813_9 10551 12137 + HTH_AraC | HTH_AraC
CAZyme k141_123813 k141_123813_10 12203 13339 + GH109
TF k141_123813 k141_123813_11 14043 14579 + HTH_3
TC k141_123813 k141_123813_12 14612 15694 + 3.A.1.11.8
TC k141_123813 k141_123813_13 15687 16676 + 3.A.1.11.7
TC k141_123813 k141_123813_14 16673 17215 + 3.A.1.11.8
Gene ID: k141_123813_2
Type: TC
Location: 1420 - 2289 (+)
Gene ID: k141_123813_3
Type: pfam
Location: 2656 - 3387 (-)
Gene ID: k141_123813_4
Type: pfam
Location: 3541 - 4290 (-)
Gene ID: k141_123813_5
Type: TC
Location: 5444 - 7255 (-)
Gene ID: k141_123813_6
Type: STP
Location: 7442 - 8665 (+)
Gene ID: k141_123813_7
Type: TC
Location: 8749 - 9660 (+)
Gene ID: k141_123813_8
Type: TC
Location: 9673 - 10506 (+)
Gene ID: k141_123813_9
Type: TF
Location: 10551 - 12137 (+)
Gene ID: k141_123813_10
Type: CAZyme
Location: 12203 - 13339 (+)
Gene ID: k141_123813_11
Type: TF
Location: 14043 - 14579 (+)
Gene ID: k141_123813_12
Type: TC
Location: 14612 - 15694 (+)
Gene ID: k141_123813_13
Type: TC
Location: 15687 - 16676 (+)
Gene ID: k141_123813_14
Type: TC
Location: 16673 - 17215 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_123813_2 vegetarian > omnivore 1.03895 0.01540

🧭 Explore Read Mapping of CGC

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