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Cluster: AG032_bin.84_sub_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_69058 k141_69058_1 360 1298 + 3.A.1.1.29
TC k141_69058 k141_69058_2 1317 2228 + 3.A.1.1.29
TC k141_69058 k141_69058_3 2287 3921 + 3.A.1.1.29
TC k141_69058 k141_69058_4 3984 5771 + 8.A.59.2.1
TF k141_69058 k141_69058_5 5749 7254 + HTH_AraC | HTH_AraC
CAZyme k141_69058 k141_69058_6 7251 8267 + GH5_37
CAZyme k141_69058 k141_69058_7 8748 10742 + GH42
pfam k141_69058 k141_69058_8 11164 12033 + Amidohydro_2
CAZyme k141_69058 k141_69058_9 12129 13094 + GH43_35
Gene ID: k141_69058_1
Type: TC
Location: 360 - 1298 (+)
Gene ID: k141_69058_2
Type: TC
Location: 1317 - 2228 (+)
Gene ID: k141_69058_3
Type: TC
Location: 2287 - 3921 (+)
Gene ID: k141_69058_4
Type: TC
Location: 3984 - 5771 (+)
Gene ID: k141_69058_5
Type: TF
Location: 5749 - 7254 (+)
Gene ID: k141_69058_6
Type: CAZyme
Location: 7251 - 8267 (+)
Gene ID: k141_69058_7
Type: CAZyme
Location: 8748 - 10742 (+)
Gene ID: k141_69058_8
Type: pfam
Location: 11164 - 12033 (+)
Gene ID: k141_69058_9
Type: CAZyme
Location: 12129 - 13094 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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