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Cluster: AG032_bin.84_sub_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_232348 k141_232348_4 3935 5806 + 3.A.16.1.2
pfam k141_232348 k141_232348_5 5811 6461 + Flavodoxin_2 | FMN_red
CAZyme k141_232348 k141_232348_6 6551 8635 - GH31_4
CAZyme k141_232348 k141_232348_7 8811 11030 - GH31_3
CAZyme k141_232348 k141_232348_8 11068 12534 - GH29
pfam k141_232348 k141_232348_9 12813 14516 - SBP_bac_8
TC k141_232348 k141_232348_10 14582 15517 - 3.A.1.1.29
TC k141_232348 k141_232348_11 15532 18081 - 3.A.1.1.29
CAZyme k141_232348 k141_232348_12 18117 19697 - GH35
TF k141_232348 k141_232348_13 19940 20752 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_232348 k141_232348_14 20904 21599 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_232348 k141_232348_15 21649 23304 - 3.A.1.20.1
TC k141_232348 k141_232348_16 23309 24388 - 3.A.1.20.1
TC k141_232348 k141_232348_17 24460 25485 - 3.A.1.20.1
TC k141_232348 k141_232348_18 25631 26059 - 2.A.7.21.8
CAZyme k141_232348 k141_232348_19 26279 27016 + CE4
Gene ID: k141_232348_4
Type: TC
Location: 3935 - 5806 (+)
Gene ID: k141_232348_5
Type: pfam
Location: 5811 - 6461 (+)
Gene ID: k141_232348_6
Type: CAZyme
Location: 6551 - 8635 (-)
Gene ID: k141_232348_7
Type: CAZyme
Location: 8811 - 11030 (-)
Gene ID: k141_232348_8
Type: CAZyme
Location: 11068 - 12534 (-)
Gene ID: k141_232348_9
Type: pfam
Location: 12813 - 14516 (-)
Gene ID: k141_232348_10
Type: TC
Location: 14582 - 15517 (-)
Gene ID: k141_232348_11
Type: TC
Location: 15532 - 18081 (-)
Gene ID: k141_232348_12
Type: CAZyme
Location: 18117 - 19697 (-)
Gene ID: k141_232348_13
Type: TF
Location: 19940 - 20752 (+)
Gene ID: k141_232348_14
Type:
Location: 20904 - 21599 (+)
Gene ID: k141_232348_15
Type: TC
Location: 21649 - 23304 (-)
Gene ID: k141_232348_16
Type: TC
Location: 23309 - 24388 (-)
Gene ID: k141_232348_17
Type: TC
Location: 24460 - 25485 (-)
Gene ID: k141_232348_18
Type: TC
Location: 25631 - 26059 (-)
Gene ID: k141_232348_19
Type: CAZyme
Location: 26279 - 27016 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_232348_6 vegetarian > omnivore 1.04324 0.01540
k141_232348_7 vegetarian > omnivore 1.04570 0.01540
k141_232348_8 vegetarian > omnivore 1.03845 0.01540
k141_232348_9 vegetarian > omnivore 1.76072 0.01540
k141_232348_10 vegetarian > omnivore 1.18306 0.01540
k141_232348_11 vegetarian > omnivore 1.36118 0.01540
k141_232348_12 vegetarian > omnivore 1.96951 0.01540
k141_232348_14 vegetarian > omnivore 2.59073 0.01540
k141_232348_15 vegetarian > vegan 1.69443 0.01135
k141_232348_17 vegetarian > vegan 1.43222 0.01135
k141_232348_18 vegetarian > omnivore 1.93027 0.01540

🧭 Explore Read Mapping of CGC

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