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Cluster: AG019_maxbin.021_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_243216 k141_243216_105 173538 174659 + GH43_33
TF k141_243216 k141_243216_106 174817 178785 + HTH_AraC
TC k141_243216 k141_243216_107 179128 182190 + 1.B.14.6.1
pfam k141_243216 k141_243216_108 182204 183784 + SusD_RagB | SusD-like_3
CAZyme k141_243216 k141_243216_109 183819 184928 + GH43_3
pfam k141_243216 k141_243216_110 185047 186975 + FG-GAP_3 | FG-GAP_3 | FG-GAP_3
pfam k141_243216 k141_243216_111 187065 187661 + Por_Secre_tail
CAZyme k141_243216 k141_243216_112 187673 189679 + GH93
CAZyme k141_243216 k141_243216_113 189690 191510 + GH2
CAZyme k141_243216 k141_243216_114 191525 193654 + GH172
Gene ID: k141_243216_105
Type: CAZyme
Location: 173538 - 174659 (+)
Gene ID: k141_243216_106
Type: TF
Location: 174817 - 178785 (+)
Gene ID: k141_243216_107
Type: TC
Location: 179128 - 182190 (+)
Gene ID: k141_243216_108
Type: pfam
Location: 182204 - 183784 (+)
Gene ID: k141_243216_109
Type: CAZyme
Location: 183819 - 184928 (+)
Gene ID: k141_243216_110
Type: pfam
Location: 185047 - 186975 (+)
Gene ID: k141_243216_111
Type: pfam
Location: 187065 - 187661 (+)
Gene ID: k141_243216_112
Type: CAZyme
Location: 187673 - 189679 (+)
Gene ID: k141_243216_113
Type: CAZyme
Location: 189690 - 191510 (+)
Gene ID: k141_243216_114
Type: CAZyme
Location: 191525 - 193654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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