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Cluster: AG019_maxbin.021_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42804 k141_42804_33 47504 48130 + 2.A.124.1.4
pfam k141_42804 k141_42804_34 48472 50265 + tRNA-synt_1d | DALR_1
TC k141_42804 k141_42804_35 50296 50994 + 1.A.14.2.2
pfam k141_42804 k141_42804_36 51032 52504 + tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
TC k141_42804 k141_42804_37 52619 54304 - 2.A.53.3.9
CAZyme k141_42804 k141_42804_38 54581 56956 - CBM35 | CBM35
Gene ID: k141_42804_33
Type: TC
Location: 47504 - 48130 (+)
Gene ID: k141_42804_34
Type: pfam
Location: 48472 - 50265 (+)
Gene ID: k141_42804_35
Type: TC
Location: 50296 - 50994 (+)
Gene ID: k141_42804_36
Type: pfam
Location: 51032 - 52504 (+)
Gene ID: k141_42804_37
Type: TC
Location: 52619 - 54304 (-)
Gene ID: k141_42804_38
Type: CAZyme
Location: 54581 - 56956 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_42804_37 vegetarian > vegan 1.27793 0.02258

🧭 Explore Read Mapping of CGC

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