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Cluster: AG019_maxbin.021_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_226428 k141_226428_1 409 2316 - 1.A.33.1.2
STP k141_226428 k141_226428_2 2682 3095 + Glyoxalase
TC k141_226428 k141_226428_3 3101 4654 + 3.B.1.1.2
pfam k141_226428 k141_226428_4 4676 5590 + LTD | OAD_gamma
pfam k141_226428 k141_226428_5 5618 6046 + Biotin_lipoyl | Biotin_lipoyl_2
TC k141_226428 k141_226428_6 6051 7208 + 3.B.1.1.2
TF k141_226428 k141_226428_7 7415 8311 - HTH_AraC
TC k141_226428 k141_226428_8 8469 9503 + 2.A.6.2.19
TC k141_226428 k141_226428_9 9500 12589 + 2.A.6.2.37
pfam k141_226428 k141_226428_10 12604 13902 + OEP | OEP
peptidase k141_226428 k141_226428_11 14007 15404 - S09.UPC
CAZyme k141_226428 k141_226428_12 15790 18015 - GH3
pfam k141_226428 k141_226428_13 18039 19823 - DUF5040 | CBM96
CAZyme k141_226428 k141_226428_14 19840 21672 - GH3
CAZyme k141_226428 k141_226428_15 21734 22087 + GH16_3
NULL(UNKNOWN) k141_226428 k141_226428_16 22547 23041 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_226428 k141_226428_17 23055 23579 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_226428 k141_226428_18 23527 24804 + GH16_3
Gene ID: k141_226428_1
Type: TC
Location: 409 - 2316 (-)
Gene ID: k141_226428_2
Type: STP
Location: 2682 - 3095 (+)
Gene ID: k141_226428_3
Type: TC
Location: 3101 - 4654 (+)
Gene ID: k141_226428_4
Type: pfam
Location: 4676 - 5590 (+)
Gene ID: k141_226428_5
Type: pfam
Location: 5618 - 6046 (+)
Gene ID: k141_226428_6
Type: TC
Location: 6051 - 7208 (+)
Gene ID: k141_226428_7
Type: TF
Location: 7415 - 8311 (-)
Gene ID: k141_226428_8
Type: TC
Location: 8469 - 9503 (+)
Gene ID: k141_226428_9
Type: TC
Location: 9500 - 12589 (+)
Gene ID: k141_226428_10
Type: pfam
Location: 12604 - 13902 (+)
Gene ID: k141_226428_11
Type: peptidase
Location: 14007 - 15404 (-)
Gene ID: k141_226428_12
Type: CAZyme
Location: 15790 - 18015 (-)
Gene ID: k141_226428_13
Type: pfam
Location: 18039 - 19823 (-)
Gene ID: k141_226428_14
Type: CAZyme
Location: 19840 - 21672 (-)
Gene ID: k141_226428_15
Type: CAZyme
Location: 21734 - 22087 (+)
Gene ID: k141_226428_16
Type:
Location: 22547 - 23041 (+)
Gene ID: k141_226428_17
Type:
Location: 23055 - 23579 (+)
Gene ID: k141_226428_18
Type: CAZyme
Location: 23527 - 24804 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_226428_2 vegan > omnivore 1.94334 0.02426
k141_226428_12 vegetarian > vegan 1.65381 0.02258
k141_226428_15 vegetarian > vegan 1.68171 0.02258

🧭 Explore Read Mapping of CGC

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