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Cluster: AG017_94_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_177147 k141_177147_17 19119 20054 + 3.D.6.1.2
TC k141_177147 k141_177147_18 20058 21410 + 3.D.6.1.2
TC k141_177147 k141_177147_19 21539 22534 + 3.D.6.1.2
pfam k141_177147 k141_177147_20 22551 23192 + FMN_bind
TC k141_177147 k141_177147_21 23217 23801 + 3.D.6.1.2
TC k141_177147 k141_177147_22 23806 24408 + 3.D.6.1.2
NULL(UNKNOWN) k141_177147 k141_177147_23 24471 24986 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_177147 k141_177147_24 25132 27918 - GH2
CAZyme k141_177147 k141_177147_25 27934 30468 - GH115
Gene ID: k141_177147_17
Type: TC
Location: 19119 - 20054 (+)
Gene ID: k141_177147_18
Type: TC
Location: 20058 - 21410 (+)
Gene ID: k141_177147_19
Type: TC
Location: 21539 - 22534 (+)
Gene ID: k141_177147_20
Type: pfam
Location: 22551 - 23192 (+)
Gene ID: k141_177147_21
Type: TC
Location: 23217 - 23801 (+)
Gene ID: k141_177147_22
Type: TC
Location: 23806 - 24408 (+)
Gene ID: k141_177147_23
Type:
Location: 24471 - 24986 (+)
Gene ID: k141_177147_24
Type: CAZyme
Location: 25132 - 27918 (-)
Gene ID: k141_177147_25
Type: CAZyme
Location: 27934 - 30468 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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