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Cluster: AG015_94_sub_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_353987 k141_353987_20 19192 20334 - GT4
CAZyme k141_353987 k141_353987_21 20331 21476 - GT4
pfam k141_353987 k141_353987_22 21535 22575 - Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
pfam k141_353987 k141_353987_23 22596 23660 - NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix
TC k141_353987 k141_353987_24 23657 25042 - 9.B.18.1.3
STP k141_353987 k141_353987_25 25568 26344 - Response_reg | Spo0A_C
NULL(UNKNOWN) k141_353987 k141_353987_26 26537 27853 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_353987 k141_353987_27 27856 29571 - GH26
CAZyme k141_353987 k141_353987_28 29585 31894 - GH95
Gene ID: k141_353987_20
Type: CAZyme
Location: 19192 - 20334 (-)
Gene ID: k141_353987_21
Type: CAZyme
Location: 20331 - 21476 (-)
Gene ID: k141_353987_22
Type: pfam
Location: 21535 - 22575 (-)
Gene ID: k141_353987_23
Type: pfam
Location: 22596 - 23660 (-)
Gene ID: k141_353987_24
Type: TC
Location: 23657 - 25042 (-)
Gene ID: k141_353987_25
Type: STP
Location: 25568 - 26344 (-)
Gene ID: k141_353987_26
Type:
Location: 26537 - 27853 (-)
Gene ID: k141_353987_27
Type: CAZyme
Location: 27856 - 29571 (-)
Gene ID: k141_353987_28
Type: CAZyme
Location: 29585 - 31894 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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