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Cluster: AG015_94_sub_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_354531 k141_354531_22 22649 24514 + CBM35 | GH26
CAZyme k141_354531 k141_354531_23 24536 26995 + GH9
TC k141_354531 k141_354531_24 27110 28927 + 3.A.16.1.2
STP k141_354531 k141_354531_25 29003 29536 + Pribosyltran
CAZyme k141_354531 k141_354531_26 29606 33583 - CBM77 | PL1 | PL1
TC k141_354531 k141_354531_27 33818 35125 - 9.B.160.1.10
pfam k141_354531 k141_354531_28 35360 36823 - DUF1846 | DUF1846_C
CAZyme k141_354531 k141_354531_29 37046 39127 + CBM79 | CBM79 | GH5_4
Gene ID: k141_354531_22
Type: CAZyme
Location: 22649 - 24514 (+)
Gene ID: k141_354531_23
Type: CAZyme
Location: 24536 - 26995 (+)
Gene ID: k141_354531_24
Type: TC
Location: 27110 - 28927 (+)
Gene ID: k141_354531_25
Type: STP
Location: 29003 - 29536 (+)
Gene ID: k141_354531_26
Type: CAZyme
Location: 29606 - 33583 (-)
Gene ID: k141_354531_27
Type: TC
Location: 33818 - 35125 (-)
Gene ID: k141_354531_28
Type: pfam
Location: 35360 - 36823 (-)
Gene ID: k141_354531_29
Type: CAZyme
Location: 37046 - 39127 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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