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Cluster: AG007_129_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_44952 k141_44952_12 10793 11392 + 2.A.124.1.2
pfam k141_44952 k141_44952_13 11423 12163 + Flavodoxin_2 | FMN_red
pfam k141_44952 k141_44952_14 12254 13441 - Aminotran_5
TC k141_44952 k141_44952_15 13611 14990 - 2.A.22.5.3
NULL(UNKNOWN) k141_44952 k141_44952_16 15215 17560 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_44952 k141_44952_17 17705 21955 - GT3 | GT35
CAZyme k141_44952 k141_44952_18 22428 23627 - GH57
CAZyme k141_44952 k141_44952_19 23629 24981 - GT4
CAZyme k141_44952 k141_44952_20 24981 27068 - GH133
Gene ID: k141_44952_12
Type: TC
Location: 10793 - 11392 (+)
Gene ID: k141_44952_13
Type: pfam
Location: 11423 - 12163 (+)
Gene ID: k141_44952_14
Type: pfam
Location: 12254 - 13441 (-)
Gene ID: k141_44952_15
Type: TC
Location: 13611 - 14990 (-)
Gene ID: k141_44952_16
Type:
Location: 15215 - 17560 (+)
Gene ID: k141_44952_17
Type: CAZyme
Location: 17705 - 21955 (-)
Gene ID: k141_44952_18
Type: CAZyme
Location: 22428 - 23627 (-)
Gene ID: k141_44952_19
Type: CAZyme
Location: 23629 - 24981 (-)
Gene ID: k141_44952_20
Type: CAZyme
Location: 24981 - 27068 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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