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Cluster: AG007_129_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_187827 k141_187827_35 36579 38603 - 5.A.3.3.1
NULL(UNKNOWN) k141_187827 k141_187827_36 38663 39328 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_187827 k141_187827_37 39341 39925 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_187827 k141_187827_38 40160 43318 - 2.A.6.2.46
TC k141_187827 k141_187827_39 43342 44535 - 2.A.6.2.4
TF k141_187827 k141_187827_40 45232 46293 - HTH_1
CAZyme k141_187827 k141_187827_41 47437 48615 + GH102
pfam k141_187827 k141_187827_42 48694 49176 - Asp_decarbox
CAZyme k141_187827 k141_187827_43 49218 49997 - GT111
Gene ID: k141_187827_35
Type: TC
Location: 36579 - 38603 (-)
Gene ID: k141_187827_36
Type:
Location: 38663 - 39328 (-)
Gene ID: k141_187827_37
Type:
Location: 39341 - 39925 (-)
Gene ID: k141_187827_38
Type: TC
Location: 40160 - 43318 (-)
Gene ID: k141_187827_39
Type: TC
Location: 43342 - 44535 (-)
Gene ID: k141_187827_40
Type: TF
Location: 45232 - 46293 (-)
Gene ID: k141_187827_41
Type: CAZyme
Location: 47437 - 48615 (+)
Gene ID: k141_187827_42
Type: pfam
Location: 48694 - 49176 (-)
Gene ID: k141_187827_43
Type: CAZyme
Location: 49218 - 49997 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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