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Cluster: AG004_maxbin.006_sub_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_402437 k141_402437_134 176353 178071 + 3.A.1.1.22
pfam k141_402437 k141_402437_135 178083 179447 + RDD
TF k141_402437 k141_402437_136 179444 180316 - HTH_AraC | HTH_AraC
TC k141_402437 k141_402437_137 180433 181404 + 3.A.1.1.10
TC k141_402437 k141_402437_138 181411 182268 + 3.A.1.1.29
NULL(UNKNOWN) k141_402437 k141_402437_139 182281 184032 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_402437 k141_402437_140 184029 186263 + GH110
CAZyme k141_402437 k141_402437_141 186260 189247 + GH110
NULL(UNKNOWN) k141_402437 k141_402437_142 189305 191350 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_402437 k141_402437_143 191491 192945 + Beta-AFase-like_GH127_cat
CAZyme k141_402437 k141_402437_144 192942 195215 + GH78
Gene ID: k141_402437_134
Type: TC
Location: 176353 - 178071 (+)
Gene ID: k141_402437_135
Type: pfam
Location: 178083 - 179447 (+)
Gene ID: k141_402437_136
Type: TF
Location: 179444 - 180316 (-)
Gene ID: k141_402437_137
Type: TC
Location: 180433 - 181404 (+)
Gene ID: k141_402437_138
Type: TC
Location: 181411 - 182268 (+)
Gene ID: k141_402437_139
Type:
Location: 182281 - 184032 (+)
Gene ID: k141_402437_140
Type: CAZyme
Location: 184029 - 186263 (+)
Gene ID: k141_402437_141
Type: CAZyme
Location: 186260 - 189247 (+)
Gene ID: k141_402437_142
Type:
Location: 189305 - 191350 (+)
Gene ID: k141_402437_143
Type: pfam
Location: 191491 - 192945 (+)
Gene ID: k141_402437_144
Type: CAZyme
Location: 192942 - 195215 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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