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Cluster: AG004_maxbin.006_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_291166 k141_291166_12 11538 12836 + GH30_1
TC k141_291166 k141_291166_13 12852 14363 - 3.A.1.1.26
CAZyme k141_291166 k141_291166_14 14376 15212 - GH16_3
CAZyme k141_291166 k141_291166_15 15209 16204 - GH16_3
CAZyme k141_291166 k141_291166_16 16204 19329 - GH161
NULL(UNKNOWN) k141_291166 k141_291166_17 19385 20833 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_291166 k141_291166_18 20854 22509 - Flg_new | Flg_new
TC k141_291166 k141_291166_19 22523 23494 - 3.A.1.1.18
TC k141_291166 k141_291166_20 23481 24476 - 3.A.1.1.18
STP k141_291166 k141_291166_21 24496 25953 - SBP_bac_1
CAZyme k141_291166 k141_291166_22 26130 27605 + GH16_21
Gene ID: k141_291166_12
Type: CAZyme
Location: 11538 - 12836 (+)
Gene ID: k141_291166_13
Type: TC
Location: 12852 - 14363 (-)
Gene ID: k141_291166_14
Type: CAZyme
Location: 14376 - 15212 (-)
Gene ID: k141_291166_15
Type: CAZyme
Location: 15209 - 16204 (-)
Gene ID: k141_291166_16
Type: CAZyme
Location: 16204 - 19329 (-)
Gene ID: k141_291166_17
Type:
Location: 19385 - 20833 (-)
Gene ID: k141_291166_18
Type: pfam
Location: 20854 - 22509 (-)
Gene ID: k141_291166_19
Type: TC
Location: 22523 - 23494 (-)
Gene ID: k141_291166_20
Type: TC
Location: 23481 - 24476 (-)
Gene ID: k141_291166_21
Type: STP
Location: 24496 - 25953 (-)
Gene ID: k141_291166_22
Type: CAZyme
Location: 26130 - 27605 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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