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Cluster: A94.bin_19_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A94_contig_116 A94_contig_116_323 356829 357869 - 9.B.18.2.1
TC A94_contig_116 A94_contig_116_324 357896 359332 - 2.A.66.2.16
NULL(UNKNOWN) A94_contig_116 A94_contig_116_325 359352 360524 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A94_contig_116 A94_contig_116_326 360552 361760 - GT4
NULL(UNKNOWN) A94_contig_116 A94_contig_116_327 361762 362376 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A94_contig_116 A94_contig_116_328 362407 363609 - GT4
pfam A94_contig_116 A94_contig_116_329 363615 364583 - ATP-grasp_3 | Dala_Dala_lig_C | ATPgrasp_Ter | PylC-like_N
TC A94_contig_116 A94_contig_116_330 364602 365270 - 9.B.18.1.2
pfam A94_contig_116 A94_contig_116_331 365287 366573 - DegT_DnrJ_EryC1
TC A94_contig_116 A94_contig_116_332 366586 368517 - 9.B.18.2.1
Gene ID: A94_contig_116_323
Type: TC
Location: 356829 - 357869 (-)
Gene ID: A94_contig_116_324
Type: TC
Location: 357896 - 359332 (-)
Gene ID: A94_contig_116_325
Type:
Location: 359352 - 360524 (-)
Gene ID: A94_contig_116_326
Type: CAZyme
Location: 360552 - 361760 (-)
Gene ID: A94_contig_116_327
Type:
Location: 361762 - 362376 (-)
Gene ID: A94_contig_116_328
Type: CAZyme
Location: 362407 - 363609 (-)
Gene ID: A94_contig_116_329
Type: pfam
Location: 363615 - 364583 (-)
Gene ID: A94_contig_116_330
Type: TC
Location: 364602 - 365270 (-)
Gene ID: A94_contig_116_331
Type: pfam
Location: 365287 - 366573 (-)
Gene ID: A94_contig_116_332
Type: TC
Location: 366586 - 368517 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A94_contig_116_323 vegan > omnivore 1.56856 0.02695

🧭 Explore Read Mapping of CGC

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