Cluster: A94.bin_19_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A94.bin_19
- CGC Family ID: CGCFAM_04487
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A94_contig_779 | A94_contig_779_218 | 236053 | 238164 | + | 2.A.53.4.2 |
| TF | A94_contig_779 | A94_contig_779_219 | 238274 | 239266 | + | LacI |
| CAZyme | A94_contig_779 | A94_contig_779_220 | 239430 | 242423 | + | GH2 |
| TC | A94_contig_779 | A94_contig_779_221 | 242453 | 243364 | + | 2.A.7.3.52 |
| TC | A94_contig_779 | A94_contig_779_222 | 243456 | 244838 | - | 2.A.40.7.6 |
| TC | A94_contig_779 | A94_contig_779_223 | 245025 | 246080 | - | 3.A.15.2.1 |
Gene ID: A94_contig_779_218
Type: TC
Location: 236053 - 238164 (+)
Type: TC
Location: 236053 - 238164 (+)
Gene ID: A94_contig_779_219
Type: TF
Location: 238274 - 239266 (+)
Type: TF
Location: 238274 - 239266 (+)
Gene ID: A94_contig_779_220
Type: CAZyme
Location: 239430 - 242423 (+)
Type: CAZyme
Location: 239430 - 242423 (+)
Gene ID: A94_contig_779_221
Type: TC
Location: 242453 - 243364 (+)
Type: TC
Location: 242453 - 243364 (+)
Gene ID: A94_contig_779_222
Type: TC
Location: 243456 - 244838 (-)
Type: TC
Location: 243456 - 244838 (-)
Gene ID: A94_contig_779_223
Type: TC
Location: 245025 - 246080 (-)
Type: TC
Location: 245025 - 246080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A94_contig_779_218 | vegetarian > omnivore | 1.07977 | 0.00566 |