Cluster: A94.bin_19_CGC21
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: A94.bin_19
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A94_contig_779 | A94_contig_779_194 | 208685 | 209299 | + | 3.A.1.25.5 |
| pfam | A94_contig_779 | A94_contig_779_195 | 209327 | 210610 | + | Cys_Met_Meta_PP |
| TC | A94_contig_779 | A94_contig_779_196 | 210754 | 211488 | - | 3.A.1.17.13 |
| TC | A94_contig_779 | A94_contig_779_197 | 211490 | 212569 | - | 3.A.1.17.13 |
| TC | A94_contig_779 | A94_contig_779_198 | 212566 | 213348 | - | 3.A.1.17.8 |
| pfam | A94_contig_779 | A94_contig_779_199 | 213317 | 213613 | - | Thiamine_BP |
| CAZyme | A94_contig_779 | A94_contig_779_200 | 214062 | 214847 | + | GT111 |
| NULL(UNKNOWN) | A94_contig_779 | A94_contig_779_201 | 214857 | 216065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A94_contig_779 | A94_contig_779_202 | 216096 | 217553 | + | 2.A.66.2.16 |
| NULL(UNKNOWN) | A94_contig_779 | A94_contig_779_203 | 217567 | 219000 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A94_contig_779 | A94_contig_779_204 | 219185 | 219934 | + | GT111 |
| CAZyme | A94_contig_779 | A94_contig_779_205 | 219953 | 220828 | + | GT2 |
| CAZyme | A94_contig_779 | A94_contig_779_206 | 220842 | 221963 | + | GT4 |
Gene ID: A94_contig_779_194
Type: TC
Location: 208685 - 209299 (+)
Type: TC
Location: 208685 - 209299 (+)
Gene ID: A94_contig_779_195
Type: pfam
Location: 209327 - 210610 (+)
Type: pfam
Location: 209327 - 210610 (+)
Gene ID: A94_contig_779_196
Type: TC
Location: 210754 - 211488 (-)
Type: TC
Location: 210754 - 211488 (-)
Gene ID: A94_contig_779_197
Type: TC
Location: 211490 - 212569 (-)
Type: TC
Location: 211490 - 212569 (-)
Gene ID: A94_contig_779_198
Type: TC
Location: 212566 - 213348 (-)
Type: TC
Location: 212566 - 213348 (-)
Gene ID: A94_contig_779_199
Type: pfam
Location: 213317 - 213613 (-)
Type: pfam
Location: 213317 - 213613 (-)
Gene ID: A94_contig_779_200
Type: CAZyme
Location: 214062 - 214847 (+)
Type: CAZyme
Location: 214062 - 214847 (+)
Gene ID: A94_contig_779_201
Type:
Location: 214857 - 216065 (+)
Type:
Location: 214857 - 216065 (+)
Gene ID: A94_contig_779_202
Type: TC
Location: 216096 - 217553 (+)
Type: TC
Location: 216096 - 217553 (+)
Gene ID: A94_contig_779_203
Type:
Location: 217567 - 219000 (+)
Type:
Location: 217567 - 219000 (+)
Gene ID: A94_contig_779_204
Type: CAZyme
Location: 219185 - 219934 (+)
Type: CAZyme
Location: 219185 - 219934 (+)
Gene ID: A94_contig_779_205
Type: CAZyme
Location: 219953 - 220828 (+)
Type: CAZyme
Location: 219953 - 220828 (+)
Gene ID: A94_contig_779_206
Type: CAZyme
Location: 220842 - 221963 (+)
Type: CAZyme
Location: 220842 - 221963 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A94_contig_779_199 | vegan > omnivore | 1.19966 | 0.02695 |
| A94_contig_779_199 | vegetarian > omnivore | 1.31095 | 0.02890 |