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Cluster: A94.bin_19_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A94_contig_779 A94_contig_779_72 52929 55733 + 8.A.59.4.1
TF A94_contig_779 A94_contig_779_73 55948 56814 - HTH_AraC | HTH_AraC
CAZyme A94_contig_779 A94_contig_779_74 57009 59267 + GT35
TF A94_contig_779 A94_contig_779_75 59271 60803 + HTH_AraC | HTH_AraC
TC A94_contig_779 A94_contig_779_76 60775 62469 + 8.A.59.2.1
NULL(UNKNOWN) A94_contig_779 A94_contig_779_77 62459 64102 + NULL(UNKNOWN)
[View Structural Homologs]
TC A94_contig_779 A94_contig_779_78 64186 65553 + 3.A.1.1.45
TC A94_contig_779 A94_contig_779_79 65653 66495 + 3.A.1.1.45
TC A94_contig_779 A94_contig_779_80 66495 67373 + 3.A.1.1.45
CAZyme A94_contig_779 A94_contig_779_81 67640 69118 + GH77
Gene ID: A94_contig_779_72
Type: TC
Location: 52929 - 55733 (+)
Gene ID: A94_contig_779_73
Type: TF
Location: 55948 - 56814 (-)
Gene ID: A94_contig_779_74
Type: CAZyme
Location: 57009 - 59267 (+)
Gene ID: A94_contig_779_75
Type: TF
Location: 59271 - 60803 (+)
Gene ID: A94_contig_779_76
Type: TC
Location: 60775 - 62469 (+)
Gene ID: A94_contig_779_77
Type:
Location: 62459 - 64102 (+)
Gene ID: A94_contig_779_78
Type: TC
Location: 64186 - 65553 (+)
Gene ID: A94_contig_779_79
Type: TC
Location: 65653 - 66495 (+)
Gene ID: A94_contig_779_80
Type: TC
Location: 66495 - 67373 (+)
Gene ID: A94_contig_779_81
Type: CAZyme
Location: 67640 - 69118 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A94_contig_779_77 vegetarian > omnivore 1.23335 0.04877

🧭 Explore Read Mapping of CGC

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