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Cluster: A94.bin_19_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A94_contig_286 A94_contig_286_257 264998 265648 + 2.A.115.2.14
TF A94_contig_286 A94_contig_286_258 265705 266547 - HTH_AraC | HTH_AraC
TC A94_contig_286 A94_contig_286_259 266793 268103 + 3.A.1.1.28
TC A94_contig_286 A94_contig_286_260 268100 268975 + 3.A.1.1.45
TC A94_contig_286 A94_contig_286_261 268975 269811 + 3.A.1.1.28
CAZyme A94_contig_286 A94_contig_286_262 269908 272706 + GH36
CAZyme A94_contig_286 A94_contig_286_263 272696 274165 + GH13_18
NULL(UNKNOWN) A94_contig_286 A94_contig_286_264 274192 274545 + NULL(UNKNOWN)
[View Structural Homologs]
TF A94_contig_286 A94_contig_286_265 274854 275228 + GntR
TC A94_contig_286 A94_contig_286_266 275247 276098 + 3.A.1.132.6
Gene ID: A94_contig_286_257
Type: TC
Location: 264998 - 265648 (+)
Gene ID: A94_contig_286_258
Type: TF
Location: 265705 - 266547 (-)
Gene ID: A94_contig_286_259
Type: TC
Location: 266793 - 268103 (+)
Gene ID: A94_contig_286_260
Type: TC
Location: 268100 - 268975 (+)
Gene ID: A94_contig_286_261
Type: TC
Location: 268975 - 269811 (+)
Gene ID: A94_contig_286_262
Type: CAZyme
Location: 269908 - 272706 (+)
Gene ID: A94_contig_286_263
Type: CAZyme
Location: 272696 - 274165 (+)
Gene ID: A94_contig_286_264
Type:
Location: 274192 - 274545 (+)
Gene ID: A94_contig_286_265
Type: TF
Location: 274854 - 275228 (+)
Gene ID: A94_contig_286_266
Type: TC
Location: 275247 - 276098 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A94_contig_286_263 vegetarian > omnivore 1.06299 0.02890
A94_contig_286_263 vegetarian > vegan 1.44081 0.02605

🧭 Explore Read Mapping of CGC

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