Cluster: A93.bin_5_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A93.bin_5
- CGC Family ID: CGCFAM_00149
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_410 | A93_contig_410_757 | 817735 | 818343 | + | 9.B.104.1.3 |
| pfam | A93_contig_410 | A93_contig_410_758 | 818333 | 819325 | + | SCP2 |
| pfam | A93_contig_410 | A93_contig_410_759 | 819343 | 819762 | + | HIT | CwfJ_C_1 | DcpS_C |
| CAZyme | A93_contig_410 | A93_contig_410_760 | 819778 | 820842 | + | GT28 |
Gene ID: A93_contig_410_757
Type: TC
Location: 817735 - 818343 (+)
Type: TC
Location: 817735 - 818343 (+)
Gene ID: A93_contig_410_758
Type: pfam
Location: 818333 - 819325 (+)
Type: pfam
Location: 818333 - 819325 (+)
Gene ID: A93_contig_410_759
Type: pfam
Location: 819343 - 819762 (+)
Type: pfam
Location: 819343 - 819762 (+)
Gene ID: A93_contig_410_760
Type: CAZyme
Location: 819778 - 820842 (+)
Type: CAZyme
Location: 819778 - 820842 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_410_760 | vegan > omnivore | 1.14463 | 0.01176 |