Cluster: A93.bin_5_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A93.bin_5
- CGC Family ID: CGCFAM_00457
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_410 | A93_contig_410_333 | 387872 | 390352 | - | 3.A.9.1.2 |
| TF | A93_contig_410 | A93_contig_410_334 | 390349 | 390741 | - | GntR |
| pfam | A93_contig_410 | A93_contig_410_335 | 390788 | 392071 | - | Cadherin-like |
| CAZyme | A93_contig_410 | A93_contig_410_336 | 392101 | 393990 | - | GH73 |
Gene ID: A93_contig_410_333
Type: TC
Location: 387872 - 390352 (-)
Type: TC
Location: 387872 - 390352 (-)
Gene ID: A93_contig_410_334
Type: TF
Location: 390349 - 390741 (-)
Type: TF
Location: 390349 - 390741 (-)
Gene ID: A93_contig_410_335
Type: pfam
Location: 390788 - 392071 (-)
Type: pfam
Location: 390788 - 392071 (-)
Gene ID: A93_contig_410_336
Type: CAZyme
Location: 392101 - 393990 (-)
Type: CAZyme
Location: 392101 - 393990 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_410_336 | vegan > omnivore | 1.06975 | 0.01176 |