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Cluster: A93.bin_5_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A93_contig_410 A93_contig_410_2500 2703420 2704286 - 2.A.7.2.1
TC A93_contig_410 A93_contig_410_2501 2704288 2705646 - 2.A.66.1.33
pfam A93_contig_410 A93_contig_410_2502 2705643 2706206 - His_Phos_1
TC A93_contig_410 A93_contig_410_2503 2706276 2707481 - 2.A.36.2.1
pfam A93_contig_410 A93_contig_410_2504 2707948 2708781 - Hydrolase | S6PP | Hydrolase_3
CAZyme A93_contig_410 A93_contig_410_2505 2708939 2712181 - CBM6 | GH43_16
pfam A93_contig_410 A93_contig_410_2506 2712290 2714050 - Transket_pyr | Transketolase_C | DXP_synthase_N | DXP_synthase_N
STP A93_contig_410 A93_contig_410_2507 2714065 2714685 - TetR_N
TC A93_contig_410 A93_contig_410_2508 2714702 2715706 - 8.A.5.1.6
Gene ID: A93_contig_410_2500
Type: TC
Location: 2703420 - 2704286 (-)
Gene ID: A93_contig_410_2501
Type: TC
Location: 2704288 - 2705646 (-)
Gene ID: A93_contig_410_2502
Type: pfam
Location: 2705643 - 2706206 (-)
Gene ID: A93_contig_410_2503
Type: TC
Location: 2706276 - 2707481 (-)
Gene ID: A93_contig_410_2504
Type: pfam
Location: 2707948 - 2708781 (-)
Gene ID: A93_contig_410_2505
Type: CAZyme
Location: 2708939 - 2712181 (-)
Gene ID: A93_contig_410_2506
Type: pfam
Location: 2712290 - 2714050 (-)
Gene ID: A93_contig_410_2507
Type: STP
Location: 2714065 - 2714685 (-)
Gene ID: A93_contig_410_2508
Type: TC
Location: 2714702 - 2715706 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A93_contig_410_2504 vegan > omnivore 1.36548 0.01176

🧭 Explore Read Mapping of CGC

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