Cluster: A93.bin_5_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A93.bin_5
- CGC Family ID: CGCFAM_00351
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_410 | A93_contig_410_2369 | 2552211 | 2553074 | - | 3.A.1.1.39 |
| TC | A93_contig_410 | A93_contig_410_2370 | 2553092 | 2554027 | - | 3.A.1.1.11 |
| pfam | A93_contig_410 | A93_contig_410_2371 | 2554043 | 2557162 | - | SBP_bac_8 |
| CAZyme | A93_contig_410 | A93_contig_410_2372 | 2557441 | 2559018 | + | CBM91 | GH43_12 |
Gene ID: A93_contig_410_2369
Type: TC
Location: 2552211 - 2553074 (-)
Type: TC
Location: 2552211 - 2553074 (-)
Gene ID: A93_contig_410_2370
Type: TC
Location: 2553092 - 2554027 (-)
Type: TC
Location: 2553092 - 2554027 (-)
Gene ID: A93_contig_410_2371
Type: pfam
Location: 2554043 - 2557162 (-)
Type: pfam
Location: 2554043 - 2557162 (-)
Gene ID: A93_contig_410_2372
Type: CAZyme
Location: 2557441 - 2559018 (+)
Type: CAZyme
Location: 2557441 - 2559018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_410_2370 | vegan > omnivore | 1.22569 | 0.01176 |