Cluster: A93.bin_5_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A93.bin_5
- CGC Family ID: CGCFAM_00347
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A93_contig_410 | A93_contig_410_2362 | 2541853 | 2543820 | - | GH67 |
| STP | A93_contig_410 | A93_contig_410_2363 | 2543978 | 2545411 | - | SBP_bac_1 |
| TC | A93_contig_410 | A93_contig_410_2364 | 2545534 | 2546526 | - | 3.A.1.1.11 |
| TC | A93_contig_410 | A93_contig_410_2365 | 2546519 | 2547433 | - | 3.A.1.1.10 |
Gene ID: A93_contig_410_2362
Type: CAZyme
Location: 2541853 - 2543820 (-)
Type: CAZyme
Location: 2541853 - 2543820 (-)
Gene ID: A93_contig_410_2363
Type: STP
Location: 2543978 - 2545411 (-)
Type: STP
Location: 2543978 - 2545411 (-)
Gene ID: A93_contig_410_2364
Type: TC
Location: 2545534 - 2546526 (-)
Type: TC
Location: 2545534 - 2546526 (-)
Gene ID: A93_contig_410_2365
Type: TC
Location: 2546519 - 2547433 (-)
Type: TC
Location: 2546519 - 2547433 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_410_2364 | vegan > omnivore | 1.10794 | 0.01176 |