Cluster: A93.bin_5_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A93.bin_5
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_410 | A93_contig_410_1228 | 1326144 | 1327565 | - | 2.A.25.1.4 |
| pfam | A93_contig_410 | A93_contig_410_1229 | 1327716 | 1328666 | + | zf-like |
| TC | A93_contig_410 | A93_contig_410_1230 | 1328758 | 1330581 | + | 3.A.1.120.6 |
| CAZyme | A93_contig_410 | A93_contig_410_1231 | 1330723 | 1333701 | + | GH97 |
Gene ID: A93_contig_410_1228
Type: TC
Location: 1326144 - 1327565 (-)
Type: TC
Location: 1326144 - 1327565 (-)
Gene ID: A93_contig_410_1229
Type: pfam
Location: 1327716 - 1328666 (+)
Type: pfam
Location: 1327716 - 1328666 (+)
Gene ID: A93_contig_410_1230
Type: TC
Location: 1328758 - 1330581 (+)
Type: TC
Location: 1328758 - 1330581 (+)
Gene ID: A93_contig_410_1231
Type: CAZyme
Location: 1330723 - 1333701 (+)
Type: CAZyme
Location: 1330723 - 1333701 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_410_1230 | vegan > omnivore | 1.04210 | 0.01176 |
| A93_contig_410_1231 | vegan > omnivore | 2.28116 | 0.01176 |
| A93_contig_410_1231 | vegetarian > omnivore | 1.45344 | 0.02298 |