Cluster: A93.bin_5_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: A93.bin_5
- CGC Family ID: CGCFAM_02445
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_410 | A93_contig_410_1185 | 1280307 | 1281770 | + | 9.B.33.1.1 |
| TC | A93_contig_410 | A93_contig_410_1186 | 1281927 | 1282994 | + | 3.A.1.2.14 |
| TC | A93_contig_410 | A93_contig_410_1187 | 1283114 | 1284637 | + | 3.A.1.2.25 |
| TC | A93_contig_410 | A93_contig_410_1188 | 1284637 | 1285692 | + | 3.A.1.2.14 |
| TC | A93_contig_410 | A93_contig_410_1189 | 1285692 | 1286786 | + | 3.A.1.2.14 |
| CAZyme | A93_contig_410 | A93_contig_410_1190 | 1286977 | 1290474 | + | CBM22 | GH10 |
| pfam | A93_contig_410 | A93_contig_410_1191 | 1290677 | 1291645 | + | DHH |
| TC | A93_contig_410 | A93_contig_410_1192 | 1291623 | 1294151 | - | 3.A.3.2.21 |
| pfam | A93_contig_410 | A93_contig_410_1193 | 1294248 | 1294787 | + | Mntp |
| pfam | A93_contig_410 | A93_contig_410_1194 | 1294744 | 1295358 | - | VTT_dom |
| TC | A93_contig_410 | A93_contig_410_1195 | 1295763 | 1296740 | + | 9.B.10.1.1 |
| pfam | A93_contig_410 | A93_contig_410_1196 | 1296763 | 1299171 | + | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2 |
| CAZyme | A93_contig_410 | A93_contig_410_1197 | 1299203 | 1301614 | + | GT2 |
Gene ID: A93_contig_410_1185
Type: TC
Location: 1280307 - 1281770 (+)
Type: TC
Location: 1280307 - 1281770 (+)
Gene ID: A93_contig_410_1186
Type: TC
Location: 1281927 - 1282994 (+)
Type: TC
Location: 1281927 - 1282994 (+)
Gene ID: A93_contig_410_1187
Type: TC
Location: 1283114 - 1284637 (+)
Type: TC
Location: 1283114 - 1284637 (+)
Gene ID: A93_contig_410_1188
Type: TC
Location: 1284637 - 1285692 (+)
Type: TC
Location: 1284637 - 1285692 (+)
Gene ID: A93_contig_410_1189
Type: TC
Location: 1285692 - 1286786 (+)
Type: TC
Location: 1285692 - 1286786 (+)
Gene ID: A93_contig_410_1190
Type: CAZyme
Location: 1286977 - 1290474 (+)
Type: CAZyme
Location: 1286977 - 1290474 (+)
Gene ID: A93_contig_410_1191
Type: pfam
Location: 1290677 - 1291645 (+)
Type: pfam
Location: 1290677 - 1291645 (+)
Gene ID: A93_contig_410_1192
Type: TC
Location: 1291623 - 1294151 (-)
Type: TC
Location: 1291623 - 1294151 (-)
Gene ID: A93_contig_410_1193
Type: pfam
Location: 1294248 - 1294787 (+)
Type: pfam
Location: 1294248 - 1294787 (+)
Gene ID: A93_contig_410_1194
Type: pfam
Location: 1294744 - 1295358 (-)
Type: pfam
Location: 1294744 - 1295358 (-)
Gene ID: A93_contig_410_1195
Type: TC
Location: 1295763 - 1296740 (+)
Type: TC
Location: 1295763 - 1296740 (+)
Gene ID: A93_contig_410_1196
Type: pfam
Location: 1296763 - 1299171 (+)
Type: pfam
Location: 1296763 - 1299171 (+)
Gene ID: A93_contig_410_1197
Type: CAZyme
Location: 1299203 - 1301614 (+)
Type: CAZyme
Location: 1299203 - 1301614 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.