Cluster: A93.bin_5_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A93.bin_5
- CGC Family ID: CGCFAM_01943
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_410 | A93_contig_410_892 | 976887 | 978242 | - | 2.A.40.7.2 |
| STP | A93_contig_410 | A93_contig_410_893 | 978325 | 978849 | - | Pribosyltran |
| STP | A93_contig_410 | A93_contig_410_894 | 979650 | 981059 | + | Pribosyltran |
| CAZyme | A93_contig_410 | A93_contig_410_895 | 981084 | 982787 | + | GH18 |
Gene ID: A93_contig_410_892
Type: TC
Location: 976887 - 978242 (-)
Type: TC
Location: 976887 - 978242 (-)
Gene ID: A93_contig_410_893
Type: STP
Location: 978325 - 978849 (-)
Type: STP
Location: 978325 - 978849 (-)
Gene ID: A93_contig_410_894
Type: STP
Location: 979650 - 981059 (+)
Type: STP
Location: 979650 - 981059 (+)
Gene ID: A93_contig_410_895
Type: CAZyme
Location: 981084 - 982787 (+)
Type: CAZyme
Location: 981084 - 982787 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_410_892 | vegan > omnivore | 1.25253 | 0.01176 |
| A93_contig_410_894 | vegan > omnivore | 1.09168 | 0.01176 |