Cluster: A93.bin_5_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: A93.bin_5
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_410 | A93_contig_410_793 | 857523 | 858959 | + | 9.B.18.1.2 |
| CAZyme | A93_contig_410 | A93_contig_410_794 | 858952 | 860097 | + | GT4 |
| CAZyme | A93_contig_410 | A93_contig_410_795 | 860094 | 861092 | + | GT2 |
| TC | A93_contig_410 | A93_contig_410_796 | 861109 | 861912 | + | 3.A.1.103.1 |
| TC | A93_contig_410 | A93_contig_410_797 | 861926 | 862666 | + | 3.A.1.103.1 |
| CAZyme | A93_contig_410 | A93_contig_410_798 | 862676 | 864430 | + | GT2 |
Gene ID: A93_contig_410_793
Type: TC
Location: 857523 - 858959 (+)
Type: TC
Location: 857523 - 858959 (+)
Gene ID: A93_contig_410_794
Type: CAZyme
Location: 858952 - 860097 (+)
Type: CAZyme
Location: 858952 - 860097 (+)
Gene ID: A93_contig_410_795
Type: CAZyme
Location: 860094 - 861092 (+)
Type: CAZyme
Location: 860094 - 861092 (+)
Gene ID: A93_contig_410_796
Type: TC
Location: 861109 - 861912 (+)
Type: TC
Location: 861109 - 861912 (+)
Gene ID: A93_contig_410_797
Type: TC
Location: 861926 - 862666 (+)
Type: TC
Location: 861926 - 862666 (+)
Gene ID: A93_contig_410_798
Type: CAZyme
Location: 862676 - 864430 (+)
Type: CAZyme
Location: 862676 - 864430 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp003491505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_410_794 | vegan > omnivore | 1.22583 | 0.01176 |
| A93_contig_410_797 | vegan > omnivore | 1.59923 | 0.01176 |