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Cluster: A93.CMAG_1_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A93_contig_205 A93_contig_205_720 766405 767703 - 3.D.10.1.4
pfam A93_contig_205 A93_contig_205_721 767759 769186 - Radical_SAM | BATS
CAZyme A93_contig_205 A93_contig_205_722 769348 771750 - GH94
NULL(UNKNOWN) A93_contig_205 A93_contig_205_723 771967 773469 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase A93_contig_205 A93_contig_205_724 773701 775551 - C44.UPW
CAZyme A93_contig_205 A93_contig_205_725 775617 776897 - GH27
Gene ID: A93_contig_205_720
Type: TC
Location: 766405 - 767703 (-)
Gene ID: A93_contig_205_721
Type: pfam
Location: 767759 - 769186 (-)
Gene ID: A93_contig_205_722
Type: CAZyme
Location: 769348 - 771750 (-)
Gene ID: A93_contig_205_723
Type:
Location: 771967 - 773469 (-)
Gene ID: A93_contig_205_724
Type: peptidase
Location: 773701 - 775551 (-)
Gene ID: A93_contig_205_725
Type: CAZyme
Location: 775617 - 776897 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A93_contig_205_720 vegan > omnivore 1.43256 0.00062
A93_contig_205_720 vegetarian > omnivore 1.29434 0.00019
A93_contig_205_723 vegan > omnivore 1.46659 0.00062
A93_contig_205_723 vegetarian > omnivore 1.79149 0.00019
A93_contig_205_724 vegan > omnivore 1.99757 0.00062
A93_contig_205_724 vegetarian > omnivore 2.42096 0.00019
A93_contig_205_725 vegan > omnivore 1.86896 0.00062
A93_contig_205_725 vegetarian > omnivore 3.26375 0.00019
A93_contig_205_725 vegetarian > vegan 1.39479 0.02164

🧭 Explore Read Mapping of CGC

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