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Cluster: A93.CMAG_1_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A93_contig_205 A93_contig_205_671 710037 711947 + GT2
NULL(UNKNOWN) A93_contig_205 A93_contig_205_672 712263 712640 - NULL(UNKNOWN)
[View Structural Homologs]
STP A93_contig_205 A93_contig_205_673 712821 713798 - Peripla_BP_1
TC A93_contig_205 A93_contig_205_674 713913 715955 - 1.B.52.2.2
Gene ID: A93_contig_205_671
Type: CAZyme
Location: 710037 - 711947 (+)
Gene ID: A93_contig_205_672
Type:
Location: 712263 - 712640 (-)
Gene ID: A93_contig_205_673
Type: STP
Location: 712821 - 713798 (-)
Gene ID: A93_contig_205_674
Type: TC
Location: 713913 - 715955 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A93_contig_205_671 vegan > omnivore 2.49258 0.00062
A93_contig_205_671 vegetarian > omnivore 2.92626 0.00019
A93_contig_205_672 vegan > omnivore 2.72402 0.00062
A93_contig_205_672 vegetarian > omnivore 2.58022 0.00019
A93_contig_205_673 vegan > omnivore 1.69844 0.00062
A93_contig_205_673 vegetarian > omnivore 3.14033 0.00019
A93_contig_205_673 vegetarian > vegan 1.44189 0.02826
A93_contig_205_674 vegan > omnivore 2.37190 0.00062
A93_contig_205_674 vegetarian > omnivore 3.38422 0.00019
A93_contig_205_674 vegetarian > vegan 1.01232 0.02826

🧭 Explore Read Mapping of CGC

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