Cluster: A93.CMAG_1_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: A93.CMAG_1
- CGC Family ID: CGCFAM_00011
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_205 | A93_contig_205_482 | 493255 | 494016 | - | 3.A.1.103.1 |
| TC | A93_contig_205 | A93_contig_205_483 | 494698 | 495489 | - | 3.A.1.103.1 |
| pfam | A93_contig_205 | A93_contig_205_484 | 495502 | 497337 | - | Glft2_N |
| CAZyme | A93_contig_205 | A93_contig_205_485 | 497383 | 498402 | - | GT2 |
| CAZyme | A93_contig_205 | A93_contig_205_486 | 498402 | 499634 | - | GT4 |
| TC | A93_contig_205 | A93_contig_205_487 | 499582 | 500334 | - | 3.A.1.3.25 |
| TC | A93_contig_205 | A93_contig_205_488 | 500358 | 501944 | - | 3.A.1.3.15 |
Gene ID: A93_contig_205_482
Type: TC
Location: 493255 - 494016 (-)
Type: TC
Location: 493255 - 494016 (-)
Gene ID: A93_contig_205_483
Type: TC
Location: 494698 - 495489 (-)
Type: TC
Location: 494698 - 495489 (-)
Gene ID: A93_contig_205_484
Type: pfam
Location: 495502 - 497337 (-)
Type: pfam
Location: 495502 - 497337 (-)
Gene ID: A93_contig_205_485
Type: CAZyme
Location: 497383 - 498402 (-)
Type: CAZyme
Location: 497383 - 498402 (-)
Gene ID: A93_contig_205_486
Type: CAZyme
Location: 498402 - 499634 (-)
Type: CAZyme
Location: 498402 - 499634 (-)
Gene ID: A93_contig_205_487
Type: TC
Location: 499582 - 500334 (-)
Type: TC
Location: 499582 - 500334 (-)
Gene ID: A93_contig_205_488
Type: TC
Location: 500358 - 501944 (-)
Type: TC
Location: 500358 - 501944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter sp003529475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_205_482 | vegan > omnivore | 2.07952 | 0.00062 |
| A93_contig_205_482 | vegetarian > omnivore | 2.84798 | 0.00019 |
| A93_contig_205_484 | vegan > omnivore | 1.88533 | 0.00062 |
| A93_contig_205_484 | vegetarian > omnivore | 2.26155 | 0.00019 |
| A93_contig_205_485 | vegan > omnivore | 2.26693 | 0.00062 |
| A93_contig_205_485 | vegetarian > omnivore | 3.22601 | 0.00019 |
| A93_contig_205_486 | vegan > omnivore | 2.17228 | 0.00062 |
| A93_contig_205_486 | vegetarian > omnivore | 3.18057 | 0.00019 |
| A93_contig_205_486 | vegetarian > vegan | 1.00829 | 0.02826 |
| A93_contig_205_488 | vegan > omnivore | 2.71665 | 0.00062 |
| A93_contig_205_488 | vegetarian > omnivore | 1.91413 | 0.00019 |