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Cluster: A93.CMAG_1_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A93_contig_205 A93_contig_205_2417 2763893 2765209 - 9.A.40.2.1
TC A93_contig_205 A93_contig_205_2418 2765697 2766413 + 3.A.1.15.4
TC A93_contig_205 A93_contig_205_2419 2766432 2767250 + 3.A.1.15.2
pfam A93_contig_205 A93_contig_205_2420 2767274 2769160 + MTHFR | S-methyl_trans
TC A93_contig_205 A93_contig_205_2421 2769287 2770918 + 3.A.1.121.4
NULL(UNKNOWN) A93_contig_205 A93_contig_205_2422 2771144 2771314 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) A93_contig_205 A93_contig_205_2423 2771355 2771816 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A93_contig_205 A93_contig_205_2424 2772259 2774127 + GH13_11
NULL(UNKNOWN) A93_contig_205 A93_contig_205_2425 2774240 2774434 - NULL(UNKNOWN)
[View Structural Homologs]
pfam A93_contig_205 A93_contig_205_2426 2774586 2775071 + DUF5721
TC A93_contig_205 A93_contig_205_2427 2775249 2776991 + 3.A.15.4.1
TC A93_contig_205 A93_contig_205_2428 2777061 2778122 + 3.A.15.2.1
TC A93_contig_205 A93_contig_205_2429 2778357 2779577 + 3.A.15.2.1
pfam A93_contig_205 A93_contig_205_2430 2779670 2780155 + N_methyl
TC A93_contig_205 A93_contig_205_2431 2780186 2780953 + 1.A.54.5.3
Gene ID: A93_contig_205_2417
Type: TC
Location: 2763893 - 2765209 (-)
Gene ID: A93_contig_205_2418
Type: TC
Location: 2765697 - 2766413 (+)
Gene ID: A93_contig_205_2419
Type: TC
Location: 2766432 - 2767250 (+)
Gene ID: A93_contig_205_2420
Type: pfam
Location: 2767274 - 2769160 (+)
Gene ID: A93_contig_205_2421
Type: TC
Location: 2769287 - 2770918 (+)
Gene ID: A93_contig_205_2422
Type:
Location: 2771144 - 2771314 (+)
Gene ID: A93_contig_205_2423
Type:
Location: 2771355 - 2771816 (+)
Gene ID: A93_contig_205_2424
Type: CAZyme
Location: 2772259 - 2774127 (+)
Gene ID: A93_contig_205_2425
Type:
Location: 2774240 - 2774434 (-)
Gene ID: A93_contig_205_2426
Type: pfam
Location: 2774586 - 2775071 (+)
Gene ID: A93_contig_205_2427
Type: TC
Location: 2775249 - 2776991 (+)
Gene ID: A93_contig_205_2428
Type: TC
Location: 2777061 - 2778122 (+)
Gene ID: A93_contig_205_2429
Type: TC
Location: 2778357 - 2779577 (+)
Gene ID: A93_contig_205_2430
Type: pfam
Location: 2779670 - 2780155 (+)
Gene ID: A93_contig_205_2431
Type: TC
Location: 2780186 - 2780953 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A93_contig_205_2417 vegan > omnivore 2.10993 0.00062
A93_contig_205_2417 vegetarian > omnivore 2.26002 0.00019
A93_contig_205_2418 vegan > omnivore 2.52830 0.00062
A93_contig_205_2418 vegetarian > omnivore 2.52963 0.00019
A93_contig_205_2419 vegetarian > omnivore 1.79612 0.00019
A93_contig_205_2419 vegan > omnivore 1.75009 0.00062
A93_contig_205_2420 vegetarian > omnivore 3.06543 0.00019
A93_contig_205_2420 vegan > omnivore 2.52770 0.00062
A93_contig_205_2424 vegan > omnivore 2.32914 0.00062
A93_contig_205_2424 vegetarian > omnivore 2.34964 0.00019
A93_contig_205_2425 vegan > omnivore 1.83446 0.00062
A93_contig_205_2425 vegetarian > omnivore 1.75668 0.00019
A93_contig_205_2426 vegan > omnivore 1.27396 0.00062
A93_contig_205_2426 vegetarian > omnivore 2.03009 0.00019
A93_contig_205_2427 vegan > omnivore 1.31652 0.00062
A93_contig_205_2427 vegetarian > omnivore 1.50486 0.00019
A93_contig_205_2428 vegan > omnivore 3.40566 0.00062
A93_contig_205_2428 vegetarian > omnivore 4.43049 0.00019
A93_contig_205_2428 vegetarian > vegan 1.02483 0.02826
A93_contig_205_2429 vegan > omnivore 3.21203 0.00062
A93_contig_205_2429 vegetarian > omnivore 3.99406 0.00019
A93_contig_205_2431 vegan > omnivore 1.94256 0.00062
A93_contig_205_2431 vegetarian > omnivore 2.02145 0.00019

🧭 Explore Read Mapping of CGC

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