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Cluster: A93.CMAG_1_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A93_contig_205 A93_contig_205_1702 1932325 1933416 + CE2
TC A93_contig_205 A93_contig_205_1703 1933568 1934242 - 2.A.115.2.3
NULL(UNKNOWN) A93_contig_205 A93_contig_205_1704 1934294 1934545 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A93_contig_205 A93_contig_205_1705 1934562 1936331 + ABC_ATPase | ABC_N | MRB1590_C
CAZyme A93_contig_205 A93_contig_205_1706 1936624 1938984 + GH5_4
Gene ID: A93_contig_205_1702
Type: CAZyme
Location: 1932325 - 1933416 (+)
Gene ID: A93_contig_205_1703
Type: TC
Location: 1933568 - 1934242 (-)
Gene ID: A93_contig_205_1704
Type:
Location: 1934294 - 1934545 (+)
Gene ID: A93_contig_205_1705
Type: pfam
Location: 1934562 - 1936331 (+)
Gene ID: A93_contig_205_1706
Type: CAZyme
Location: 1936624 - 1938984 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A93_contig_205_1702 vegan > omnivore 2.82889 0.00062
A93_contig_205_1702 vegetarian > omnivore 2.64071 0.00019
A93_contig_205_1703 vegan > omnivore 2.92889 0.00062
A93_contig_205_1703 vegetarian > omnivore 3.58162 0.00019
A93_contig_205_1704 vegan > omnivore 3.13202 0.00062
A93_contig_205_1704 vegetarian > omnivore 2.56580 0.00019
A93_contig_205_1705 vegan > omnivore 2.28861 0.00062
A93_contig_205_1705 vegetarian > omnivore 2.37899 0.00019
A93_contig_205_1706 vegan > omnivore 2.58888 0.00062
A93_contig_205_1706 vegetarian > omnivore 2.92419 0.00019

🧭 Explore Read Mapping of CGC

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