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Cluster: A93.CMAG_1_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A93_contig_205 A93_contig_205_1502 1696421 1698646 + CBM48 | GH13_9
NULL(UNKNOWN) A93_contig_205 A93_contig_205_1503 1698722 1699273 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A93_contig_205 A93_contig_205_1504 1699433 1699846 + Fic
TC A93_contig_205 A93_contig_205_1505 1700140 1701702 + 1.I.1.1.3
Gene ID: A93_contig_205_1502
Type: CAZyme
Location: 1696421 - 1698646 (+)
Gene ID: A93_contig_205_1503
Type:
Location: 1698722 - 1699273 (+)
Gene ID: A93_contig_205_1504
Type: pfam
Location: 1699433 - 1699846 (+)
Gene ID: A93_contig_205_1505
Type: TC
Location: 1700140 - 1701702 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A93_contig_205_1503 vegan > omnivore 2.40785 0.00062
A93_contig_205_1503 vegetarian > omnivore 1.93011 0.00019
A93_contig_205_1505 vegan > omnivore 1.28662 0.00062

🧭 Explore Read Mapping of CGC

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