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Cluster: A93.CMAG_1_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A93_contig_205 A93_contig_205_1471 1660174 1661616 + 9.A.11.1.1
TC A93_contig_205 A93_contig_205_1472 1661754 1663202 + 2.A.111.1.2
TF A93_contig_205 A93_contig_205_1473 1663235 1664134 - HTH_AraC
CAZyme A93_contig_205 A93_contig_205_1474 1664353 1666992 + GH5_4
Gene ID: A93_contig_205_1471
Type: TC
Location: 1660174 - 1661616 (+)
Gene ID: A93_contig_205_1472
Type: TC
Location: 1661754 - 1663202 (+)
Gene ID: A93_contig_205_1473
Type: TF
Location: 1663235 - 1664134 (-)
Gene ID: A93_contig_205_1474
Type: CAZyme
Location: 1664353 - 1666992 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A93_contig_205_1471 vegan > omnivore 1.48127 0.00062
A93_contig_205_1471 vegetarian > omnivore 2.03058 0.00019
A93_contig_205_1472 vegetarian > omnivore 1.05620 0.00019
A93_contig_205_1474 vegan > omnivore 1.49633 0.00062
A93_contig_205_1474 vegetarian > omnivore 1.70542 0.00019

🧭 Explore Read Mapping of CGC

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