Cluster: A93.CMAG_1_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A93.CMAG_1
- CGC Family ID: CGCFAM_04485
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A93_contig_205 | A93_contig_205_860 | 973850 | 974413 | + | 2.A.88.1.2 |
| pfam | A93_contig_205 | A93_contig_205_861 | 974511 | 975191 | - | RelA_SpoT |
| TC | A93_contig_205 | A93_contig_205_862 | 975216 | 977945 | - | 3.A.16.1.2 |
| peptidase | A93_contig_205 | A93_contig_205_863 | 978187 | 979800 | + | C26.964 |
| pfam | A93_contig_205 | A93_contig_205_864 | 979894 | 981972 | - | Beta_propel |
| CAZyme | A93_contig_205 | A93_contig_205_865 | 982041 | 982712 | - | CE4 |
Gene ID: A93_contig_205_860
Type: TC
Location: 973850 - 974413 (+)
Type: TC
Location: 973850 - 974413 (+)
Gene ID: A93_contig_205_861
Type: pfam
Location: 974511 - 975191 (-)
Type: pfam
Location: 974511 - 975191 (-)
Gene ID: A93_contig_205_862
Type: TC
Location: 975216 - 977945 (-)
Type: TC
Location: 975216 - 977945 (-)
Gene ID: A93_contig_205_863
Type: peptidase
Location: 978187 - 979800 (+)
Type: peptidase
Location: 978187 - 979800 (+)
Gene ID: A93_contig_205_864
Type: pfam
Location: 979894 - 981972 (-)
Type: pfam
Location: 979894 - 981972 (-)
Gene ID: A93_contig_205_865
Type: CAZyme
Location: 982041 - 982712 (-)
Type: CAZyme
Location: 982041 - 982712 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter sp003529475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A93_contig_205_860 | vegan > omnivore | 2.87409 | 0.00062 |
| A93_contig_205_860 | vegetarian > omnivore | 3.30891 | 0.00019 |
| A93_contig_205_861 | vegan > omnivore | 1.54426 | 0.00062 |
| A93_contig_205_861 | vegetarian > omnivore | 2.58081 | 0.00019 |
| A93_contig_205_861 | vegetarian > vegan | 1.03655 | 0.02826 |
| A93_contig_205_864 | vegan > omnivore | 2.02465 | 0.00062 |
| A93_contig_205_864 | vegetarian > omnivore | 2.16743 | 0.00019 |
| A93_contig_205_865 | vegan > omnivore | 2.27944 | 0.00062 |
| A93_contig_205_865 | vegetarian > omnivore | 2.84514 | 0.00019 |